Rodent Behavior Tests

Every calculator, analyzer, and scorer we publish, organized by paradigm. Pick a test, run the math, then connect the assay to apparatus and ConductVision video automation.

30+ tools10 paradigmsFree, no login

Anxiety

Tests that use a rodent's natural approach-avoidance conflict to index anxiety-like behavior.

6 tools

Elevated Plus Maze

1

Anxiety Index, percent open arm time, locomotion control

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Light-Dark Box

2

Time and entries in light versus dark compartment

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Open Field

3

Center versus periphery, locomotion, thigmotaxis

Open tool

Marble Burying

4

Percent marbles at least two-thirds buried, anxiety and repetitive behavior

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Acoustic Startle

5

Mean startle amplitude and habituation slope

Open tool

Prepulse Inhibition

6

Percent PPI and sensorimotor gating

Open tool

Depression

Behavioral assays of behavioral despair and anhedonia, including FST, TST, and sucrose preference.

4 tools

Forced Swim Test

Immobility time and behavioral despair summary

Open tool

Tail Suspension Test

Immobility time, a non-aquatic alternative to FST

Open tool

FST/TST Manual Scorer

Per-animal manual scoring with timestamps

Open tool

Sucrose Preference

Anhedonia threshold and preference percentage

Open tool

Memory

Spatial, recognition, and associative memory paradigms.

8 tools

Morris Water Maze

Escape latency, path efficiency, probe quadrant time

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Barnes Maze

Errors, primary latency, total latency, search strategy

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Y-Maze Alternation

Percent spontaneous alternation and working memory

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T-Maze Percent Correct

Rewarded alternation and working-memory accuracy

Open tool

Radial Arm Maze

Reference and working memory errors

Open tool

Novel Object Recognition

Discrimination index and recognition memory

Open tool

Fear Conditioning

Cued and contextual freezing for associative memory

Open tool

Active/Passive Avoidance

Step-down or shuttle avoidance memory

Open tool

Motor

Strength, coordination, balance, and asymmetry assays.

5 tools

Rotarod

Latency to fall on an accelerating rod

Open tool

Pole Test

T-turn and T-total latency for bradykinesia

Open tool

Beam Walk

Traversal time and foot slips

Open tool

Wire Hang

Best and mean hang time for neuromuscular endurance

Open tool

Cylinder Test

Schallert asymmetry index for unilateral lesion models

Open tool

Social

Sociability and social-novelty paradigms.

2 tools

Three-Chamber Sociability

Social preference and social novelty

Open tool

Social Interaction

Social investigation percentage and aggression per minute

Open tool

Repetitive

Repetitive and stereotyped behavior assays for autism-spectrum disorder models.

3 tools

Self-Grooming

Grooming time percentage and mean bout length

Open tool

Marble Burying

Percent marbles at least two-thirds buried

Open tool

Nest Building

Deacon five-point scale, median, and IQR

Open tool

Nociception

Acute and inflammatory pain assays.

5 tools

Von Frey Up-Down

Mechanical 50 percent withdrawal threshold

Open tool

Hot Plate

Mean response latency and cutoff handling

Open tool

Hargreaves

Plantar paw withdrawal and left/right asymmetry

Open tool

Pain Percent Maximum Effect

Percent maximum possible effect for opioid dose-response

Open tool

Cognition

Attention, impulsivity, set-shifting, and operant cognitive paradigms.

3 tools

Operant Session Analyzer

Med-PC parser and AI session QA

Open tool

5-CSRTT

Accuracy, omissions, premature responses, perseveration

Open tool

Attentional Set-Shifting

Trials-to-criterion per stage and set-shifting cost

Open tool

Reward

Drug reward and reinforcement paradigms.

1 tools

Conditioned Place Preference

Delta CPP and post-test preference percentage

Open tool

Operations

Operations tools for running a behavior core.

1 tools

Run a Behavior Core

Battery sequencer, acclimation, IRR, ethogram, SOP

Open tool
  • Find rodent behavior calculators by paradigm instead of searching one assay at a time
  • Plan mouse behavioral phenotyping batteries across anxiety, depression, memory, motor, social, pain, cognition, and reward endpoints
  • Link from a calculator to the broader behavior-core workflow and relevant apparatus categories

Don't use for

  • Replacing protocol review, veterinary oversight, or IACUC approval
  • Claiming automated scoring validity without local video and rater validation

Resources

  • Primary endpoint and backup endpoint named before data collection
  • Motor, sensory, or locomotor controls selected where needed
  • One-trial novelty tests placed before severe stressors
  • Acclimation and handling schedule written by cohort
  • Scoring rubric and exclusion rules written before unblinding
  • Battery order and rest days included in the methods section

Choosing a paradigm

A paradigm should map to the hypothesis before it maps to a famous assay name. Elevated plus maze and light-dark box both measure approach-avoidance conflict, but they differ in light level, height, novelty, and locomotor demand. Morris water maze, Barnes maze, Y-maze, and novel object recognition all touch memory, but they ask different questions about spatial learning, working memory, and recognition.

Pair the primary endpoint with a control that can explain false positives. For example, open-field locomotion helps interpret anxiety and depression assays, rotarod helps interpret maze performance, and sensory or motor checks help interpret pain and startle outcomes.

Designing a battery

A good battery protects interpretation. Run handling and acclimation the same way for every cohort. Put baseline exploration and motor checks early. Keep high-stress tests late. Avoid repeating one-shot anxiety assays in a way that turns novelty into learning.

Recommended order is a planning tool, not a universal rule. Strain, sex, age, lighting, apparatus geometry, prior handling, and disease model can all change the right sequence. Write the rationale before data collection starts.

Reporting standards

Report the apparatus, dimensions, lighting, cleaning agent, habituation, trial duration, exclusion rules, scoring method, rater blinding, and statistical plan. For video tracking, report sampling rate, zone definitions, smoothing, threshold values, and any manual corrections.

For multi-test batteries, report the exact order and spacing. A result from an elevated plus maze after fear conditioning is not the same experimental context as elevated plus maze after handling and open field.

Frequently Asked Questions