Behavioral Mazes

Fear Conditioning System

SKU ME-FCM-R
$6,900.00
IncludesStandard care · Standard delivery

Acrylic chamber system for contextual and cued fear conditioning studies in mice and rats, featuring interchangeable visual contexts and integrated video tracking capability.

Size SKU ME-FCM-R
$6,900.00
Scientist guidance
Louise Corscadden, PhD, Director of Science

Louise Corscadden, PhD

Director of Science · ConductScience

Ask Louise about Fear Conditioning System fit, setup, configuration, or quote prep.

Key Specifications

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Model fit
Mouse, Rat
SKU family
ME-FCS-M
Sizing
43.2 x 38.0 x 27.9 cm
Ordering
Online checkout and quote request available
Category
Behavioral Mazes
Build notes
Acrylic
Category: Behavioral Mazes
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Use this apparatus with

The complete Fear Conditioning System workflow

Configuration considerations

Common Fear Conditioning System setup decisions

Use these notes to scope species, cohort, tracking, and automation needs. Only verified product or support routes are linked from this section.

This productStandard chamber

Standard Fear Conditioning Chamber

Sound-attenuating enclosure with grid-floor shocker, speaker, house light, and overhead camera

Standard configuration for cued and contextual conditioning, recording percent freezing across baseline, CS presentations, and context re-exposure with a calibrated grid-floor shocker.

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BuyableMouse or rat

Species-Scaled Chamber

Enclosure volume, grid-bar spacing, and current range scaled for mouse or rat body size

Grid-bar spacing and current calibration change how the unconditioned stimulus is delivered, so the chamber geometry should match the species and body weight being tested.

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SpecialtyContext-swap kit

Context-Swap / Extinction Kit

Interchangeable wall, floor, and odor inserts for distinct conditioning and test contexts

Best when the question is context discrimination or extinction across sessions, where distinct visual, tactile, and odor cues are needed to separate contextual from cued recall.

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§ 1

Introduction

The Fear Conditioning System measures associative learning by pairing a neutral conditioned stimulus (CS) with an aversive unconditioned stimulus and recording the conditioned freezing response. Fanselow characterized freezing as the dominant species-typical response after foot shock, which made percent freezing a tractable, automatable readout of learned associations. 1

Cued and contextual conditioning dissociate distinct circuits: differential lesion work shows the amygdala is required for the cued response while the hippocampus contributes to contextual memory. Recording baseline, CS, and context epochs separately lets a single apparatus report both forms of learning from one cohort. 1

Shock calibration, context generalization, baseline locomotor activity, and the freezing-detection threshold all change percent freezing independent of true memory. A defensible protocol calibrates and reports shock current, separates conditioning and test contexts, verifies shock reactivity as a quality-control check, and fixes the freezing threshold before any data are scored. 1

§ 2

Methods

2.1 Procedure

Cued and contextual acquisition with calibrated shock delivery, epoch-locked freezing scoring, and shock-reactivity quality control.

Pre-test setup

  1. 1.Acclimation and handlingHabituate animals to the room and to handling so the first measured baseline reflects the context rather than transport or handling stress.
  2. 2.Shock calibrationVerify grid-floor current with a meter and confirm the unconditioned response (flinch, run, vocalize) at the chosen intensity before any conditioning session.
  3. 3.Define contexts and CSFix the conditioning context, the distinct test context, the CS modality and duration, and the CS-shock interval before data are collected so cued and contextual recall remain separable.
  4. 4.Set freezing thresholdDecide in advance the motion threshold and minimum bout duration that define freezing, because automated and hand-scored thresholds change percent freezing systematically.

Trial sequence

  1. 1.Record baselinePlace the animal in the conditioning context and record a pre-CS baseline freezing period before the first stimulus to establish a within-subject control.
  2. 2.Pair CS and shockPresent the CS and co-terminate it with the calibrated foot shock, logging the unconditioned shock reactivity as a delivery check.1
  3. 3.Test contextual recallReturn the animal to the conditioning context without the CS and score contextual freezing across the session.2
  4. 4.Test cued recallMove the animal to the distinct test context, present the CS without shock, and score cued freezing against the pre-CS period in that same context.3
  5. 5.Clean between subjectsRun the planned sessions, then clean the chamber, grid floor, and inserts to remove odor and urine cues before the next subject.5

Critical methodological constraints

  • Shock calibration. Uncalibrated current makes the unconditioned stimulus inconsistent across chambers and sessions. Measure current, confirm the unconditioned response, and report the intensity.5
  • Context generalization. If the test context resembles the conditioning context, cued freezing is contaminated by contextual recall. Use distinct visual, tactile, and odor cues for the two contexts.7
  • Baseline locomotor activity. Low-activity animals can appear to freeze during the pre-CS period. Report baseline freezing and interpret CS and context epochs relative to it.
  • Freezing-detection threshold. Motion thresholds and minimum bout length change measured percent freezing. Fix the threshold before scoring and apply it identically across groups.5

2.2 Measurement & Analysis

Core fear-conditioning endpoints for cued and contextual learning, with shock-reactivity and tracking quality control.

Cued Freezing

Conditioned response

Percent freezing during CS presentation in the test context, the primary readout of the learned cue-shock association.3

Contextual Freezing

Context memory

Percent freezing on re-exposure to the conditioning context without the CS, indexing hippocampus-dependent contextual recall.2

Baseline Freezing

Pre-CS control

Freezing during the pre-CS baseline period, used as a within-subject reference for the conditioned epochs.

Shock Reactivity

Unconditioned response and QC

Movement or activity burst at shock onset, confirming the unconditioned stimulus was delivered and detected.5

Motion Index

Tracking QC

Continuous motion signal used to derive freezing; flat or saturated traces flag camera, lighting, or threshold problems.

+ Additional metrics: freezing-bout count and duration, latency to first freeze, per-CS freezing across trials, time of day, chamber ID, and per-session apparatus notes.

2.3 cued-freezing fraction (analysis)

A compact fraction of recorded freezing time that fell within the cued CS period versus outside it.

Inline calculator

Type the values your tracker recorded.

Full calculator with 95% CI ->
Cued-freezing fraction

75.0%

Formula: cued-CS freezing time / (cued-CS freezing time + non-CS time) x 100. Interpret with baseline freezing, shock reactivity, and context separation because a high fraction can still reflect context generalization rather than a specific cued association. 1

2.4 sample-size planning

Estimate the N per group needed to detect a literature-anchored conditioning effect at the endpoint you plan to report. Override the defaults with your own pilot numbers.

sample-size planning

Estimate the N per group needed to detect a literature-anchored conditioning effect at the endpoint you plan to report. Override the defaults with your own pilot numbers.

Hippocampal-lesion vs control rat tested for contextual recall; representative magnitudes from Phillips & LeDoux (1992).2

Cohen's d

2.31

N per group at 80% power

3

Total N

6

With attrition cushion

7

At 70% / 90% power

3 / 4

Methods sentence

Need ANOVA, proportions, paired design, or a power curve? Open in the full Sample-Size Calculator →

Formula: n = 2 · ((zα/2 + zβ) / d)2, where d = |μ₁ − μ₂| / σ. Assumes equal allocation, normality, and homoskedasticity. The attrition cushion inflates total N by 1 / (1 − dropout); confirm with your IACUC.

§ 3

Results

Aggregate publication data, sample apparatus output, and recent findings from the live PubMed feed.

3.1 Publication trends

PubMed volume and co-occurring behavioral methods for rodent fear-conditioning studies.

Figure 1 · EPM publications by year (PubMed)

The paradigm has been dominant for 40 years and is still growing.

Live · Weekly

2000201020202025 YTD: 420 papers

Total in PubMed since 1985: 9,120+ papers. Updated 2026-06-12.

Figure 2 · Methods co-occurring with EPM (last 12 months)

Other paradigms most often run alongside EPM in the same paper.

Live

3.2 Sample apparatus output

Representative output from a cued-and-contextual fear conditioning session.

Table 1 · Per-animal EPM scoring output

Download sample CSV →
AnimalGroupBaseline freezingContext freezingCued freezingCued fraction
FC-001Control6%52%61%74.0%
FC-002Control5%49%58%72.5%
FC-003Control7%55%64%76.1%
FC-004Lesion6%21%57%73.2%
FC-005Lesion5%18%54%71.0%
FC-006Lesion7%24%60%75.0%

Synthetic example for illustration only. Pair freezing with baseline freezing, shock reactivity, and context separation before interpreting differences between cued and contextual recall.

3.3 Recent findings (live PubMed feed)

  • Jun 2026Source note

    Fear-conditioning methods continue to emphasize shock calibration and distinct conditioning versus test contexts.

    Static methods note aligned with Fanselow (1980), Phillips & LeDoux (1992), and Anagnostaras et al. (2010).

    Review fear-conditioning studies for measured and reported shock current, distinct conditioning and test contexts, a fixed freezing-detection threshold, and shock-reactivity quality control before interpreting cued versus contextual freezing.

    Methods overviewReproducibility
  • Jun 2026Source note

    Cued and contextual freezing as separable readouts: report baseline and shock reactivity alongside conditioned epochs.

    Static methods note aligned with Maren (2001) and Curzon et al. (2009).

    Percent freezing in a single epoch is a screening signal. A specific learned association is most defensible when cued and contextual freezing are contrasted against the pre-CS baseline and matched shock reactivity in the same cohort.

    Cued vs contextualQuality control

View all 9120matching papers on PubMed ->

§ 4

Discussion

Limitations of the paradigm, methodological caveats, and current directions.

4.1 Common confounds

Variables that shift Fear Conditioning System results independent of anxiety state.

Shock calibration

Uncalibrated grid current makes the unconditioned stimulus vary between chambers and sessions, changing acquisition independent of the manipulation. Measure and report current.

Context generalization

When the test context resembles the conditioning context, cued freezing is inflated by contextual recall. Distinct cues are needed to keep the two epochs separable.

Baseline locomotor activity

Naturally low-activity animals can register as freezing before any CS, biasing percent-freezing comparisons. Report and reference the pre-CS baseline.

Freezing-detection threshold

Motion thresholds and minimum bout length change measured percent freezing, so an inconsistent threshold can manufacture or hide group differences.

Chamber cleaning and odor cues

Residual urine and odor act as carry-over contextual cues for the next subject. Standardize cleaning between animals and between contexts.

Confound checklist

Tick the confounds your protocol addresses, then export a methods-paragraph blurb you can paste into your manuscript.

Preview exported markdown
## Fear Conditioning System — methods controls

Confounds controlled in this protocol:

- **Shock calibration.** Uncalibrated grid current makes the unconditioned stimulus vary between chambers and sessions, changing acquisition independent of the manipulation. Measure and report current.
- **Context generalization.** When the test context resembles the conditioning context, cued freezing is inflated by contextual recall. Distinct cues are needed to keep the two epochs separable.
- **Baseline locomotor activity.** Naturally low-activity animals can register as freezing before any CS, biasing percent-freezing comparisons. Report and reference the pre-CS baseline.
- **Freezing-detection threshold.** Motion thresholds and minimum bout length change measured percent freezing, so an inconsistent threshold can manufacture or hide group differences.
- **Chamber cleaning and odor cues.** Residual urine and odor act as carry-over contextual cues for the next subject. Standardize cleaning between animals and between contexts.

4.2 Construct validity caveats

Fear conditioning is strongest when shock current, context cues, the CS parameters, and the freezing threshold are fixed and reported before testing. Percent freezing in one epoch is a screening signal; confirm a specific association by contrasting cued and contextual freezing against baseline and shock reactivity in the same cohort. 1

4.3 Special considerations

How do I separate cued from contextual memory?

Test contextual recall in the original conditioning context without the CS, then test cued recall in a distinct context with the CS. Distinct visual, tactile, and odor cues are what keep the two epochs interpretable.

Why report shock reactivity?

Shock reactivity confirms the unconditioned stimulus was delivered and detected equally across groups. A group difference in freezing is hard to attribute to learning if shock reactivity also differs.

Automated or hand-scored freezing?

Automated motion-index scoring is reproducible if the threshold and minimum bout length are fixed in advance and applied identically across groups. Validate the threshold against hand scoring on a subset before relying on it.

4.4 Current directions

Quarterly editorial review of emerging Fear Conditioning System methodology. Q2 2026

Methods

Shock-current standardization

Calibrating and reporting grid-floor current across rigs improves comparability of acquisition and freezing between labs and chamber models.

Emerging

Automated freezing detection

Camera-based motion scoring with fixed thresholds reduces observer burden and captures freezing bouts and latency consistently across sessions.

Methods

Context-discrimination designs

Explicit distinct conditioning and test contexts are increasingly expected to dissociate cued from contextual recall within one cohort.

Emerging

Extinction and renewal protocols

Multi-session extinction and context-renewal designs are paired with the same chamber to study the durability and context dependence of learned associations.

§ 5

References

7 selected methods and validation references for Fear Conditioning System.

  1. Fanselow MS. Conditioned and unconditional components of post-shock freezing. Pavlov J Biol Sci. 1980;15(4):177-182. doi:10.1007/BF03001163
  2. Phillips RG, LeDoux JE. Differential contribution of amygdala and hippocampus to cued and contextual fear conditioning. Behav Neurosci. 1992;106(2):274-285. doi:10.1037/0735-7044.106.2.274
  3. Maren S. Neurobiology of Pavlovian fear conditioning. Annu Rev Neurosci. 2001;24:897-931. doi:10.1146/annurev.neuro.24.1.897
  4. LeDoux JE. Emotion circuits in the brain. Annu Rev Neurosci. 2000;23:155-184. doi:10.1146/annurev.neuro.23.1.155
  5. Anagnostaras SG, Wood SC, Shuman T, et al. Automated assessment of Pavlovian conditioned freezing and shock reactivity in mice. Front Behav Neurosci. 2010;4:158. doi:10.3389/fnbeh.2010.00158
  6. Curzon P, Rustay NR, Browman KE. Cued and contextual fear conditioning for rodents. In: Methods of Behavior Analysis in Neuroscience. 2nd ed. CRC Press/Taylor & Francis. 2009. PMID:21204331
  7. Bouton ME. Context, ambiguity, and unlearning: sources of relapse after behavioral extinction. Biol Psychiatry. 2002;52(10):976-986. doi:10.1016/s0006-3223(02)01546-9
Fear Conditioning System
Fear Conditioning System
$6,900.00
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