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Conductscience Administrator
Conduct Science promotes new generations of tools for science tech transferred from academic institutions including mazes, digital health apps, virtual reality and drones for science. Our news promotes the best new methodologies in science.
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  • lab management
  • Spectrophotometer
  • care and maintenance of laboratory equipment
  • radiobiology

The spectrophotometer is a common optical device that measures the intensity of light relative to color (or wavelength). In the lab, they are used to determine how much light is absorbed by a colored chemical dissolved in solution. This allows us to calculate the concentration or purity of chemicals, analyze specific chemical characteristics, and follow and measure chemical reactions in real time.

As spectrophotometers use colored light to measure the absorbance of colored chemicals, let’s briefly describe the basic principles of color and light absorbance.

Color and light absorbance

Color

The colors we see are light waves of electromagnetic radiation and each color has a different wavelength. The wavelengths of light we can see (visible) are between 380 nanometres (nm) in the violet range (V) to 750 nm in the red range (R). Figure 1 shows the visible spectrum.

Visible light spectrum

Figure 1: Visible light spectrum. Numbers represent wavelength (nm) (source: Wikimedia Commons, public domain).

Light absorbance

Colored chemicals have color because they absorb some light waves while reflecting others. So, a red chemical absorbs all light waves and reflects the red wavelength light back to our eyes. And, a blue chemical reflects all light except for light with blue wavelengths.

Spectrophotometer components

Figure 2 shows the basic components of a spectrophotometer. Essentially, light from a specific source is split into different wavelengths (colors), then a selected wavelength passes through the sample and it’s final intensity measured. Let’s breakdown each component.

component of spectrophotometer

Figure 2: Basic components of a spectrophotometer (source: Wikimedia Commons, CC-BY-SA).

Light source

The light source for a spectrophotometer that measures visible light uses an incandescent lamp with a tungsten filament. They look like very small light bulbs with two metal prongs.

Monochromator

The monochromator takes the light from the lamp and splits into different colors or wavelengths. It works like a prism that bends light, separating the light into different wavelengths by refraction.

Aperture

The aperture is simply a hole that creates a light beam. The size of the hole can be adjusted larger or smaller.

Cuvette (with sample)

The cuvette is a small square vial that holds the solution with the colored chemical we want to measure (sample). They can be made of glass or plastic. They can hold volumes from 0.1 ml to 5ml.

Photodetector/amplifier

The photodetector is a device that can convert light into an electrical signal. And the amplifier boosts the electrical signal to increase the sensitivity.

Output

Spectrophotometers have a numerical readout to quantify the amount of light that’s absorbed as it passes through the sample. Older models use an analogue needle and dial while newer models have digital readouts.

Using a spectrophotometer

Spectrophotometers are used to measure the amount of light that’s absorbed by a colored chemical in a solution. But how do we convert the numbers on the output into usable information? To answer this question, we must understand the optical theory of absorbance described by the Beer-Lambert Law.

Beer-Lambert Law

The Beer-Lambert Law describes the relationship between absorbance and the amount of chemical in solution and the distance light has to travel through the sample.

The Beer-Lambert Law is A = εcl, where A is the absorbance (no units), ε = molar extinction coefficient (M-1 cm-1), c = concentration of the substance (M), and l = path length of the light (cm).

 

  • Absorbance (A) is determined by measuring the intensity of the light that passes through the sample (I) compared to the intensity of the original light (Io) (see Fig.2). This is called transmittance (T) and is defined by the equation T = I / Io.
    Absorbance and transmittance are related by the equation, A = -log T. So, the spectrophotometer measures T, then calculates A, which is displayed on the output reader. The higher the amount of absorbance means less light is being transmitted, which results in a higher output reading. For example, if 50% of the light is transmitted (T=0.5), then A = 0.3. Likewise, if only 10% of the light is transmitted (T=0.1), then A = 1. Absorbance has also been called optical density (or O.D.).
  • The molar extinction coefficient (ε), with units M-1 cm-1, is a constant number that relates the amount of light a chemical will absorb at a given wavelength and concentration. It can be determined by measuring the absorbance of a chemical at a specific wavelength and concentration (ε = A/c).
  • According to the Beer-Lambert equation, the absorbance is proportional to the concentration. That is, the more concentrated the colored chemical, the more light it absorbs. So, doubling the concentration will double the amount of light that’s absorbed.
  • The pathlength refers to how far the light must travel through the solution. It’s also proportional to absorbance so, likewise, doubling the pathlength doubles the absorbance. The pathlength of most cuvettes is consistently 1 cm, so pathlength units cancel out of the equation when calculating samples.

Basic measurement

Spectrophotometers have a panel area to set wavelengths, adjust other functions, and the output display. And they have a sample area with a square sample holder that nicely fits a cuvette, sitting directly in the path of the light beam shining on the detector. The sample area is also closed off to the outside light to prevent extra light from affecting the readings.

If we want to know the absorbance of a specific chemical in a solution, we must also account for the absorbance of the solution itself. So, we make two cuvettes, one with solution only (reference or blank), and one with solution plus the chemical we want to measure.

The reference solution is first put into the sample holder. The spectrophotometer has a button to “tare” the absorbance reading to A=0. Then the sample is put into the holder and the absorbance of the chemical is read on the display.

Absorbance spectrum

The absorbance spectrum of a chemical is the amount of light it absorbs at all the different wavelengths from violet to red. The spectrophotometer measures the absorbance of each different wavelength by adjusting the monochromator. Depending on the color of the solution, the absorbance will peak at specific wavelengths.

For example, figure 3 shows the absorbance spectrum of two types of chlorophyll (a,b), the biochemicals that make plants green. The plot shows the absorbance vs. wavelength(nm). We see absorbance peaks at either end for the light spectra. Chlorophyll absorbs blue and red light, and reflects green light.

Absorbance Spectrum of Chlorophyll

Figure 3. Absorbance spectrum of chlorophyll-a,-b (source: Wikimedia Commons, CC-BY-SA).

Measuring concentration

Measuring the concentration of a chemical in a solution using a spectrophotometer is it’s most common application. By rearranging Beer-Lambert equation (A = εcl) to c= A/εl, we can calculate the concentration directly from an absorbance reading. Since the pathlength (l) is 1 cm, all we need is the extinction coefficient (ε). Extinction coefficients are typically already known so it’s easy to just plug the number into the equation and calculate concentration.

For example, the ε for chlorophyll-a is 105 M−1 cm−1. Therefore, a reading of A=1.0 would mean the concentration of chlorophyll = 1.0/105 = 0.00001 Molar (M) or 0.01 mM (or 10µM).

An extinction coefficient can also be determined from an absorbance spectrum. In figure 3, there are two absorbance peaks for chlorophyll-a, one in the blue region (430nm) and the other in the red region (662nm). If a known concentration of chlorophyll-a is measured, then ε (at 430nm or 662nm) can be calculated by ε = A/c.

Kinetics – change in concentration over time

Chemical kinetics is the study of reactions over time. Using a spectrophotometer, we can monitor a chemical reaction as it occurs in real time. In the same way, we add a sample with one reactant to the cuvette and set the reading to zero. Then we add a second reactant, mix, and take absorbance readings of the product at various time points. By converting absorbance to concentration, we can plot the concentration versus time and calculate the rate of the reaction. And, by changing the concentrations of reactants, we analyze the nature of the chemical reaction itself.

Types of spectrophotometers

We’ve discussed spectrophotometers that use visible light to measure colored chemicals. There are also spectrophotometers that use ultraviolet light (UV), and some that use more than one light beam.

UV spectrophotometers

Most visible spectrophotometers also use UV light to measure non-colored chemicals that absorb UV light using wavelengths between 180nm to 400nm. Instead of a tungsten lamp as the light source, UV spectrophotometers use a deuterium lamp (D2). Also, special cuvettes made from quartz are needed as glass and most plastic cuvettes absorb UV light. There are, however, UV cuvettes made from special plastics.

The most common use for UV spectrophotometer is to measure the concentration of DNA and proteins in solution. DNA absorbs UV light at 260nm while proteins absorb UV light at 280nm.

Single beam vs double beam spectrophotometers

Single beam spectrophotometers have a single beam that shines through the sample. Before the sample is read, however, a reference sample must be measured. With a double-beam spectrophotometer, there are two beams, one for the reference sample and one for the test sample measured at the same time.

Limitations

The primary limitation of spectrophotometers is they can’t measure chemicals that don’t have color or absorb UV light. We can, however, add chemicals that react with uncolored compounds to produce a colored product that can be measured.

Spectrophotometers work best with dilute solutions that have an absorbance reading between 0 and 1. As described above, a sample that transmits only 10% of the light (90% absorbed) gives a reading of 1. Likewise, a more concentrated sample that absorbs more light and transmits 1% of the light (99% absorbed) gives a reading of 2. So, the most precise readings of absorbance are between 0 and 1 (0 to 90% absorbance). If a sample is too concentrated, it must be diluted, the absorbance read, then multiplied by the dilution factor.

Maintenance

Fortunately, spectrophotometers are built to need very little maintenance. Apart from keeping them clean and wiping up from liquid spills, the light sources need to be changed when they no longer produce enough light. It’s best to always have extra lamps on hand in case the lamps burn out.

Spectrophotometers are one of the most useful scientific instruments to detect, measure, and characterize chemicals in solutions. With chemicals that absorb light, their absorbance spectra and concentrations can be determined quickly and easily. And they can also be used to measure chemical reaction rates in real time.